BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009F01LP1|AL426060
(814 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1696 1590 0.0
>3x_Contig1696
Length = 16725
Score = 1590 bits (802), Expect = 0.0
Identities = 811/814 (99%)
Strand = Plus / Plus
Query: 1 gatctaccaaatttgtatacaacgtatcaggtagttttgctagaaaaccaactcctaggg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11783 gatctaccaaatttgtatacaacgtatcaggtagttttgctagaaaaccaactcctaggg 11842
Query: 61 tgatgatttcatctgcattgatagacggtgtctcacgtaaaaggttcataggagaggaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11843 tgatgatttcatctgcattgatagacggtgtctcacgtaaaaggttcataggagaggaag 11902
Query: 121 aaaccataatagcctgtctatttatgactaactgagccacaatgaaaaggatattcatat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11903 aaaccataatagcctgtctatttatgactaactgagccacaatgaaaaggatattcatat 11962
Query: 181 gaaatccataagcgaacatgaaatcccatagtttaataacctgatccagtggtttattac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11963 gaaatccataagcgaacatgaaatcccatagtttaataacctgatccagtggtttattac 12022
Query: 241 aggcggacaaagtcaatattgagggaatgccaaatatctctgctgtcaataaattatctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12023 aggcggacaaagtcaatattgagggaatgccaaatatctctgctgtcaataaattatctg 12082
Query: 301 ttagaaatttactcagtttagggtcaatgatctttaagcatttatccaataacttggctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12083 ttagaaatttactcagtttagggtcaatgatctttaagcatttatccaataacttggctg 12142
Query: 361 ctacatgaacgccggataaagactggttcaaataagtgggtatcatttggaagcaaagcg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12143 ctacatgaacgccggataaagactggttcaaataagtgggtatcatttggaagcaaagcg 12202
Query: 421 aatggaacagtttatatgcaataggttcggtcgggcaaacgtatagaaagggtgccagca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12203 aatggaacagtttatatgcaataggttcggtcgggcaaacgtatagaaagggtgccagca 12262
Query: 481 gcacattcataccctgcacataaggggaaagacctggaagttcatgtgtttggttactat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12263 gcacattcataccctgcacataaggggaaagacctggaagttcatgtgtttggttactat 12322
Query: 541 caagaacatcccatgcgaaacaagataggactctaattagttgcgattcagtgaccttat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12323 caagaacatcccatgcgaaacaagataggactctaattagttgcgattcagtgaccttat 12382
Query: 601 tcctaaatttttcatctgtggatagcgttctgaaagtatcatttttaatcttagagatcc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12383 tcctaaatttttcatctgtggatagcgttctgaaagtatcatttttaatcttagagatcc 12442
Query: 661 aattcgatggtggtgcgcctaattgtactagccgcagtatttcctgagtacatttttcca 720
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 12443 aattcgatggtggtgcgcctaattgtactagccgcaggtattcctgagtacatttttcca 12502
Query: 721 gcgatgctcgggagaggatggaccaaacgtgagatcttgtacgttgatgatcttcatcgg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12503 gcgatgctcgggagaggatggaccaaacgtgagatcttgtacgttgatgatcttcatcgg 12562
Query: 781 acaacccttctgataacacgaggtatcgcagttg 814
||||||||||||||||||||||||||||||||||
Sbjct: 12563 acaacccttctgataacacgaggtatcgcagttg 12596
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5127
Number of Sequences: 1807
Number of extensions: 5127
Number of successful extensions: 26
Number of sequences better than 1.0e-20: 1
length of query: 814
length of database: 10,358,551
effective HSP length: 16
effective length of query: 798
effective length of database: 10,329,639
effective search space: 8243051922
effective search space used: 8243051922
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)